4b778a4e82 
								
							
								 
							
						 
						
							
							
								
								fixed a bug in matrix solve function  
							
							
							
						 
						
							2010-01-22 06:45:01 +00:00  
				
					
						
							
							
								 
						
							
							
								1d093e388d 
								
							
								 
							
						 
						
							
							
								
								changed main algorithm to allow recovery of exact solution  
							
							
							
						 
						
							2010-01-22 06:28:12 +00:00  
				
					
						
							
							
								 
						
							
							
								75e29dc015 
								
							
								 
							
						 
						
							
							
								
								failing test  
							
							
							
						 
						
							2010-01-22 05:45:59 +00:00  
				
					
						
							
							
								 
						
							
							
								5367e5a157 
								
							
								 
							
						 
						
							
							
								
								All std::map<Symbol,T> are now SymbolMap<T>, which is just a thin wrapper around std::map.  at(Key) is used instead of first checking with find when an exception should be thrown for non-existent keys.  This does not change any behavior or timing currently.  This check-in also includes some functions in BayesTree for gathering clique statistics.  
							
							
							
						 
						
							2010-01-22 04:41:40 +00:00  
				
					
						
							
							
								 
						
							
							
								41a6e64bbb 
								
							
								 
							
						 
						
							
							
								
								Fixed insert to use IndexTable, a new class  
							
							
							
						 
						
							2010-01-22 02:27:26 +00:00  
				
					
						
							
							
								 
						
							
							
								2cc777228b 
								
							
								 
							
						 
						
							
							
								
								coments and variables only  
							
							
							
						 
						
							2010-01-21 20:15:52 +00:00  
				
					
						
							
							
								 
						
							
							
								7575996d52 
								
							
								 
							
						 
						
							
							
								
								Remove leftover commented out unused code  
							
							
							
						 
						
							2010-01-21 19:49:36 +00:00  
				
					
						
							
							
								 
						
							
							
								f89a53ed91 
								
							
								 
							
						 
						
							
							
								
								Bugfix in Rot3::logmap.  The function checked for a trace of 3, but the check could fail due to rounding errors, causing the function to try to take acos(something larger than 1) resulting in NaNs being returned.  
							
							
							
						 
						
							2010-01-21 19:49:12 +00:00  
				
					
						
							
							
								 
						
							
							
								ac746ccead 
								
							
								 
							
						 
						
							
							
								
								Improved performance of updateAb in NoiseModel with GSL/ATLAS.  Various other small optimizations were made.  
							
							
							
						 
						
							2010-01-21 18:51:59 +00:00  
				
					
						
							
							
								 
						
							
							
								2183e09c67 
								
							
								 
							
						 
						
							
							
								
								fluid relinearization works  
							
							
							
						 
						
							2010-01-21 17:41:54 +00:00  
				
					
						
							
							
								 
						
							
							
								523c8630d3 
								
							
								 
							
						 
						
							
							
								
								works at least on already solved data...  
							
							
							
						 
						
							2010-01-21 16:09:57 +00:00  
				
					
						
							
							
								 
						
							
							
								0dc4f417e9 
								
							
								 
							
						 
						
							
							
								
								sampling from NoiseModel  
							
							
							
						 
						
							2010-01-21 08:31:18 +00:00  
				
					
						
							
							
								 
						
							
							
								8fd0c2ae72 
								
							
								 
							
						 
						
							
							
								
								new fluid relinearization algorithm, in sync with lyx  
							
							
							
						 
						
							2010-01-21 07:38:37 +00:00  
				
					
						
							
							
								 
						
							
							
								9db7623f80 
								
							
								 
							
						 
						
							
							
								
								Improved instructions for GSL/ATLAS  
							
							
							
						 
						
							2010-01-21 01:03:34 +00:00  
				
					
						
							
							
								 
						
							
							
								063aa14118 
								
							
								 
							
						 
						
							
							
								
								Reimplemented matrix::householder_update using GSL and BLAS, you'll need to edit Makefile.am to enable the new version -- see email  
							
							
							
						 
						
							2010-01-21 00:59:33 +00:00  
				
					
						
							
							
								 
						
							
							
								188561d925 
								
							
								 
							
						 
						
							
							
								
								removeTop/Path now returns a BayesNet to avoid converting the conditionals to a factor graph  
							
							
							
						 
						
							2010-01-21 00:38:22 +00:00  
				
					
						
							
							
								 
						
							
							
								eb03f78e7d 
								
							
								 
							
						 
						
							
							
								
								Removing dependency hack speeds up compilation  
							
							
							
						 
						
							2010-01-20 20:47:15 +00:00  
				
					
						
							
							
								 
						
							
							
								588c119bf3 
								
							
								 
							
						 
						
							
							
								
								Added timing script for Matrix::householder_()  
							
							
							
						 
						
							2010-01-20 18:52:31 +00:00  
				
					
						
							
							
								 
						
							
							
								5f588031bc 
								
							
								 
							
						 
						
							
							
								
								Merged NoiseQR back into trunk  
							
							
							
						 
						
							2010-01-20 18:32:48 +00:00  
				
					
						
							
							
								 
						
							
							
								9c9007920a 
								
							
								 
							
						 
						
							
							
								
								Changed the interface on Matrix::column() so that it uses the one in our library (now called column_() ) rather than the boost default.  Currently, our implementation just uses the boost default, but this may change due to timing results.  
							
							
							
						 
						
							2010-01-20 16:08:14 +00:00  
				
					
						
							
							
								 
						
							
							
								98b143cd22 
								
							
								 
							
						 
						
							
							
								
								Switched all loop indices in Matrix/Vector to size_t, with improved results in timeGaussianFactorGraph  
							
							
							
						 
						
							2010-01-20 14:42:05 +00:00  
				
					
						
							
							
								 
						
							
							
								b4f9163296 
								
							
								 
							
						 
						
							
							
								
								Added more labels and results (with higher numbers of repetitions) for timeGaussianFactorGraph  
							
							
							
						 
						
							2010-01-20 14:31:24 +00:00  
				
					
						
							
							
								 
						
							
							
								8db99db57e 
								
							
								 
							
						 
						
							
							
								
								Small performance improvement for matrix_augmented, with accompanying test in timeGaussianFactor  
							
							
							
						 
						
							2010-01-20 14:09:44 +00:00  
				
					
						
							
							
								 
						
							
							
								6bc0462669 
								
							
								 
							
						 
						
							
							
								
								Checked Matrix::collect() with different timing metric, and memcpy has approx 25% speedup over original version.  Matrix_range is slower or the same speed as the original version.  
							
							
							
						 
						
							2010-01-20 13:45:22 +00:00  
				
					
						
							
							
								 
						
							
							
								977a97eacf 
								
							
								 
							
						 
						
							
							
								
								rename variable  
							
							
							
						 
						
							2010-01-20 09:47:09 +00:00  
				
					
						
							
							
								 
						
							
							
								aae49e43f0 
								
							
								 
							
						 
						
							
							
								
								code factorization, speedup  
							
							
							
						 
						
							2010-01-20 06:49:19 +00:00  
				
					
						
							
							
								 
						
							
							
								ae908316e0 
								
							
								 
							
						 
						
							
							
								
								add comments  
							
							
							
						 
						
							2010-01-20 06:34:25 +00:00  
				
					
						
							
							
								 
						
							
							
								19dc8bf4b1 
								
							
								 
							
						 
						
							
							
								
								Fixed size() crash when BayesTree empty, added clear() function to BayesTree, added and removed #includes to fix link errors  
							
							
							
						 
						
							2010-01-20 04:23:35 +00:00  
				
					
						
							
							
								 
						
							
							
								e767996b45 
								
							
								 
							
						 
						
							
							
								
								same bug fix as in ISAM2  
							
							
							
						 
						
							2010-01-20 03:54:20 +00:00  
				
					
						
							
							
								 
						
							
							
								55e414cbdd 
								
							
								 
							
						 
						
							
							
								
								Tried noalias() for collect(), but no real improvement  
							
							
							
						 
						
							2010-01-20 03:25:55 +00:00  
				
					
						
							
							
								 
						
							
							
								3bf15333af 
								
							
								 
							
						 
						
							
							
								
								move ordering into the solver, and the nonlinear optimizer is now exact <G, T, L>  
							
							
							
						 
						
							2010-01-20 02:28:23 +00:00  
				
					
						
							
							
								 
						
							
							
								03ec3e3e62 
								
							
								 
							
						 
						
							
							
								
								Implemented a version of collect() using matrix_range, but it had worse performance than memcpy.  New version of vector_scale[column] with new pointer arithmetic implementation for approx 20% improvement.  
							
							
							
						 
						
							2010-01-20 02:28:25 +00:00  
				
					
						
							
							
								 
						
							
							
								820ae5682d 
								
							
								 
							
						 
						
							
							
								
								Optimized row version of vector_scale with approx 20% improvement  
							
							
							
						 
						
							2010-01-20 02:04:25 +00:00  
				
					
						
							
							
								 
						
							
							
								ecde508318 
								
							
								 
							
						 
						
							
							
								
								incremental nonlinear working  
							
							
							
						 
						
							2010-01-20 01:52:40 +00:00  
				
					
						
							
							
								 
						
							
							
								b860f06614 
								
							
								 
							
						 
						
							
							
								
								Switched Matrix::collect() over to a memcpy, but the results weren't actually an improvement  
							
							
							
						 
						
							2010-01-20 01:42:36 +00:00  
				
					
						
							
							
								 
						
							
							
								d2291a38d1 
								
							
								 
							
						 
						
							
							
								
								bug fixes after COLAMD activiation: BayesTree::insert was wrong, BayesTree::removeTop/Path fixed and simplified  
							
							
							
						 
						
							2010-01-20 01:24:32 +00:00  
				
					
						
							
							
								 
						
							
							
								66607897a5 
								
							
								 
							
						 
						
							
							
								
								Added vector_scale timing benchmarks  
							
							
							
						 
						
							2010-01-20 01:05:40 +00:00  
				
					
						
							
							
								 
						
							
							
								ff83a7b18e 
								
							
								 
							
						 
						
							
							
								
								Fixed compile error in testNoiseModel  
							
							
							
						 
						
							2010-01-20 01:05:18 +00:00  
				
					
						
							
							
								 
						
							
							
								b47438a86c 
								
							
								 
							
						 
						
							
							
								
								Smart named constructors Covariance/Variances/Variance  
							
							
							
						 
						
							2010-01-20 00:26:49 +00:00  
				
					
						
							
							
								 
						
							
							
								f577b27f52 
								
							
								 
							
						 
						
							
							
								
								Small optimizations on Matrix::collect(), additional timing capabilities, and now collect() can have dimensions specified to avoid need for lookup.  
							
							
							
						 
						
							2010-01-19 21:49:22 +00:00  
				
					
						
							
							
								 
						
							
							
								67878830a6 
								
							
								 
							
						 
						
							
							
								
								Added timeMatrix.cpp to test specific matrix operations  
							
							
							
						 
						
							2010-01-19 20:59:22 +00:00  
				
					
						
							
							
								 
						
							
							
								3cdbaf81c7 
								
							
								 
							
						 
						
							
							
								
								Factorgraph-specific QR factorization now done by the NoiseModel: slow Gram-Schmidt for Constrained, fast Housholder for any other (Gaussian) model.  
							
							
							
						 
						
							2010-01-19 19:06:02 +00:00  
				
					
						
							
							
								 
						
							
							
								6f2b5a904a 
								
							
								 
							
						 
						
							
							
								
								save on fabs  
							
							
							
						 
						
							2010-01-19 19:04:37 +00:00  
				
					
						
							
							
								 
						
							
							
								9f4da004c2 
								
							
								 
							
						 
						
							
							
								
								got rid of verbose printing  
							
							
							
						 
						
							2010-01-19 19:04:18 +00:00  
				
					
						
							
							
								 
						
							
							
								fb0ca07bf1 
								
							
								 
							
						 
						
							
							
								
								Added and tested whitening parameter for matrix() and matrix_augmented()  
							
							
							
						 
						
							2010-01-19 16:52:01 +00:00  
				
					
						
							
							
								 
						
							
							
								fbee0bd749 
								
							
								 
							
						 
						
							
							
								
								Fixing compile issue in SubgraphPreconditioner.h  
							
							
							
						 
						
							2010-01-19 13:29:40 +00:00  
				
					
						
							
							
								 
						
							
							
								3806125096 
								
							
								 
							
						 
						
							
							
								
								add linear system as a template parameter in nonlinear optimizer  
							
							... 
							
							
							
							fixed a nasty bug and change the internal data type of subgraph preconditioner from reference to boost shared pointer. reference is not a good idea for class members, because no type checking will happen 
							
						 
						
							2010-01-19 10:46:12 +00:00  
				
					
						
							
							
								 
						
							
							
								2eac3b7235 
								
							
								 
							
						 
						
							
							
								
								minor typo - comment only  
							
							
							
						 
						
							2010-01-19 05:46:04 +00:00  
				
					
						
							
							
								 
						
							
							
								306ac0a4b2 
								
							
								 
							
						 
						
							
							
								
								Fixed clobbered checkin  
							
							
							
						 
						
							2010-01-19 05:45:25 +00:00  
				
					
						
							
							
								 
						
							
							
								88e465910a 
								
							
								 
							
						 
						
							
							
								
								SQP tests and implementation now use the new Key system  
							
							
							
						 
						
							2010-01-19 05:33:44 +00:00