gtsam/wrap/gtwrap/pybind_wrapper.py

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#!/usr/bin/env python3
"""
GTSAM Copyright 2010-2020, Georgia Tech Research Corporation,
Atlanta, Georgia 30332-0415
All Rights Reserved
See LICENSE for the license information
Code generator for wrapping a C++ module with Pybind11
Author: Duy Nguyen Ta, Fan Jiang, Matthew Sklar, Varun Agrawal, and Frank Dellaert
"""
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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# pylint: disable=too-many-arguments, too-many-instance-attributes, no-self-use, no-else-return, too-many-arguments, unused-format-string-argument, line-too-long
import re
import textwrap
Squashed 'wrap/' changes from dfa624e77..09f8bbf71 09f8bbf71 Merge pull request #25 from borglab/fix/function-name 0dbfb6c13 fix function name to be the correct one f69f8b01f Merge pull request #24 from borglab/fix/pip 6519a6627 use pip install to overcome superuser issues b11ecf4e8 Merge pull request #23 from borglab/fix/remove-pip-args 813030108 remove pip-args since we are using setup.py 498d233e0 Merge pull request #22 from borglab/fix/package-install 846212ac3 set correct flags for installing gtwrap package 62161cd20 Merge pull request #21 from borglab/feature/script-vars 93be1d9f8 set script variables and move pybind11 loading so gtwrap can be used under gtsam 8770e3c7e Merge pull request #20 from borglab/fix/pybind-include 8c3c83618 proper placement of pybind11 include a9ad4f504 Merge pull request #19 from borglab/feature/package 99d8a12c7 added more documentation 4cbec1579 change to macro so we don't have to deal with function scopes b83e405b8 updates to completely install the package 38a64b3de new scripts which will be installed to bin directory bf9646235 Merge pull request #18 from borglab/fix/cmake-min c7c280099 Consistent cmake minimum required 42df58f62 Merge pull request #17 from borglab/fix/cleanup e580b282d version bump 4ccd66fa5 More finegrained handling of Python version 6476fd710 Merge pull request #16 from borglab/feature/better-find-python 8ac1296a0 use setup.py to install dependencies e9ac473be install dependencies and support versions of CMake<3.12 cf272dbd2 Merge pull request #15 from borglab/feature/utils ffc9cc4f7 new utils to reduce boilerplate 20e8e8b7a Merge pull request #11 from borglab/feature/package 04b844bd6 use new version of FindPython and be consistent 3f9d7a32a Merge pull request #13 from borglab/add_license c791075a6 Add LICENSE 517b67c46 correct working directory for setup.py 1b22b47ae move matlab.h to root directory 37b407214 Proper source directory path for use in other projects 61696dd5d configure PybindWrap within the cmake directory 1b91fc9af add config file so we can use find_package a1e6f4f53 small typo da9f351be updated README and housekeeping 64b8f78d5 files needed to allow for packaging bddda7f54 package structure git-subtree-dir: wrap git-subtree-split: 09f8bbf7172ba8b1bd3d2484795743f16e1a5893
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import gtwrap.interface_parser as parser
import gtwrap.template_instantiator as instantiator
class PybindWrapper:
"""
Class to generate binding code for Pybind11 specifically.
"""
def __init__(self,
module,
module_name,
top_module_namespaces='',
use_boost=False,
ignore_classes=(),
module_template=""):
self.module = module
self.module_name = module_name
self.top_module_namespaces = top_module_namespaces
self.use_boost = use_boost
self.ignore_classes = ignore_classes
self._serializing_classes = list()
self.module_template = module_template
self.python_keywords = ['print', 'lambda']
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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# amount of indentation to add before each function/method declaration.
self.method_indent = '\n' + (' ' * 8)
def _py_args_names(self, args_list):
"""Set the argument names in Pybind11 format."""
names = args_list.args_names()
if names:
py_args = ['py::arg("{}")'.format(name) for name in names]
return ", " + ", ".join(py_args)
else:
return ''
def _method_args_signature_with_names(self, args_list):
"""Define the method signature types with the argument names."""
cpp_types = args_list.to_cpp(self.use_boost)
names = args_list.args_names()
types_names = ["{} {}".format(ctype, name) for ctype, name in zip(cpp_types, names)]
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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return ', '.join(types_names)
def wrap_ctors(self, my_class):
"""Wrap the constructors."""
res = ""
for ctor in my_class.ctors:
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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res += (self.method_indent + '.def(py::init<{args_cpp_types}>()'
'{py_args_names})'.format(
args_cpp_types=", ".join(ctor.args.to_cpp(self.use_boost)),
py_args_names=self._py_args_names(ctor.args),
))
return res
def _wrap_method(self, method, cpp_class, prefix, suffix, method_suffix=""):
py_method = method.name + method_suffix
cpp_method = method.to_cpp()
if cpp_method in ["serialize", "serializable"]:
if not cpp_class in self._serializing_classes:
self._serializing_classes.append(cpp_class)
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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serialize_method = self.method_indent + \
".def(\"serialize\", []({class_inst} self){{ return gtsam::serialize(*self); }})".format(class_inst=cpp_class + '*')
deserialize_method = self.method_indent + \
".def(\"deserialize\", []({class_inst} self, string serialized){{ gtsam::deserialize(serialized, *self); }}, py::arg(\"serialized\"))" \
.format(class_inst=cpp_class + '*')
return serialize_method + deserialize_method
if cpp_method == "pickle":
if not cpp_class in self._serializing_classes:
raise ValueError("Cannot pickle a class which is not serializable")
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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pickle_method = self.method_indent + \
".def(py::pickle({indent} [](const {cpp_class} &a){{ /* __getstate__: Returns a string that encodes the state of the object */ return py::make_tuple(gtsam::serialize(a)); }},{indent} [](py::tuple t){{ /* __setstate__ */ {cpp_class} obj; gtsam::deserialize(t[0].cast<std::string>(), obj); return obj; }}))"
return pickle_method.format(cpp_class=cpp_class, indent=self.method_indent)
is_method = isinstance(method, instantiator.InstantiatedMethod)
is_static = isinstance(method, parser.StaticMethod)
return_void = method.return_type.is_void()
args_names = method.args.args_names()
py_args_names = self._py_args_names(method.args)
args_signature_with_names = self._method_args_signature_with_names(method.args)
caller = cpp_class + "::" if not is_method else "self->"
function_call = ('{opt_return} {caller}{function_name}'
'({args_names});'.format(
opt_return='return' if not return_void else '',
caller=caller,
function_name=cpp_method,
args_names=', '.join(args_names),
))
ret = ('{prefix}.{cdef}("{py_method}",'
'[]({opt_self}{opt_comma}{args_signature_with_names}){{'
'{function_call}'
'}}'
'{py_args_names}){suffix}'.format(
prefix=prefix,
cdef="def_static" if is_static else "def",
py_method=py_method if not py_method in self.python_keywords
else py_method + "_",
opt_self="{cpp_class}* self".format(
cpp_class=cpp_class) if is_method else "",
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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opt_comma=', ' if is_method and args_names else '',
args_signature_with_names=args_signature_with_names,
function_call=function_call,
py_args_names=py_args_names,
suffix=suffix,
))
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
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if method.name == 'print':
type_list = method.args.to_cpp(self.use_boost)
if len(type_list) > 0 and type_list[0].strip() == 'string':
ret += '''{prefix}.def("__repr__",
[](const {cpp_class} &a) {{
gtsam::RedirectCout redirect;
a.print("");
return redirect.str();
}}){suffix}'''.format(
prefix=prefix,
cpp_class=cpp_class,
suffix=suffix,
)
else:
ret += '''{prefix}.def("__repr__",
[](const {cpp_class} &a) {{
gtsam::RedirectCout redirect;
a.print();
return redirect.str();
}}){suffix}'''.format(
prefix=prefix,
cpp_class=cpp_class,
suffix=suffix,
)
return ret
def wrap_methods(self, methods, cpp_class, prefix='\n' + ' ' * 8, suffix=''):
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
2021-03-24 12:36:02 +08:00
"""
Wrap all the methods in the `cpp_class`.
This function is also used to wrap global functions.
"""
res = ""
for method in methods:
# To avoid type confusion for insert, currently unused
if method.name == 'insert' and cpp_class == 'gtsam::Values':
name_list = method.args.args_names()
type_list = method.args.to_cpp(self.use_boost)
if type_list[0].strip() == 'size_t': # inserting non-wrapped value types
method_suffix = '_' + name_list[1].strip()
res += self._wrap_method(method=method,
cpp_class=cpp_class,
prefix=prefix,
suffix=suffix,
method_suffix=method_suffix)
res += self._wrap_method(
method=method,
cpp_class=cpp_class,
prefix=prefix,
suffix=suffix,
)
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
2021-03-24 12:36:02 +08:00
return res
def wrap_properties(self, properties, cpp_class, prefix='\n' + ' ' * 8):
"""Wrap all the properties in the `cpp_class`."""
res = ""
for prop in properties:
res += ('{prefix}.def_{property}("{property_name}", '
'&{cpp_class}::{property_name})'.format(
prefix=prefix,
property="readonly" if prop.ctype.is_const else "readwrite",
cpp_class=cpp_class,
property_name=prop.name,
))
return res
def wrap_instantiated_class(self, instantiated_class):
"""Wrap the class."""
module_var = self._gen_module_var(instantiated_class.namespaces())
cpp_class = instantiated_class.cpp_class()
if cpp_class in self.ignore_classes:
return ""
return (
'\n py::class_<{cpp_class}, {class_parent}'
'{shared_ptr_type}::shared_ptr<{cpp_class}>>({module_var}, "{class_name}")'
'{wrapped_ctors}'
'{wrapped_methods}'
'{wrapped_static_methods}'
'{wrapped_properties};\n'.format(
shared_ptr_type=('boost' if self.use_boost else 'std'),
cpp_class=cpp_class,
class_name=instantiated_class.name,
class_parent=str(instantiated_class.parent_class) +
(', ' if instantiated_class.parent_class else ''),
module_var=module_var,
wrapped_ctors=self.wrap_ctors(instantiated_class),
wrapped_methods=self.wrap_methods(instantiated_class.methods,
cpp_class),
wrapped_static_methods=self.wrap_methods(
instantiated_class.static_methods, cpp_class),
wrapped_properties=self.wrap_properties(
instantiated_class.properties, cpp_class),
))
def wrap_stl_class(self, stl_class):
"""Wrap STL containers."""
module_var = self._gen_module_var(stl_class.namespaces())
cpp_class = stl_class.cpp_class()
if cpp_class in self.ignore_classes:
return ""
return (
'\n py::class_<{cpp_class}, {class_parent}'
'{shared_ptr_type}::shared_ptr<{cpp_class}>>({module_var}, "{class_name}")'
'{wrapped_ctors}'
'{wrapped_methods}'
'{wrapped_static_methods}'
'{wrapped_properties};\n'.format(
shared_ptr_type=('boost' if self.use_boost else 'std'),
cpp_class=cpp_class,
class_name=stl_class.name,
class_parent=str(stl_class.parent_class) +
(', ' if stl_class.parent_class else ''),
module_var=module_var,
wrapped_ctors=self.wrap_ctors(stl_class),
wrapped_methods=self.wrap_methods(stl_class.methods,
cpp_class),
wrapped_static_methods=self.wrap_methods(
stl_class.static_methods, cpp_class),
wrapped_properties=self.wrap_properties(
stl_class.properties, cpp_class),
))
def _partial_match(self, namespaces1, namespaces2):
for i in range(min(len(namespaces1), len(namespaces2))):
if namespaces1[i] != namespaces2[i]:
return False
return True
def _gen_module_var(self, namespaces):
sub_module_namespaces = namespaces[len(self.top_module_namespaces):]
return "m_{}".format('_'.join(sub_module_namespaces))
def _add_namespaces(self, name, namespaces):
if namespaces:
# Ignore the first empty global namespace.
idx = 1 if not namespaces[0] else 0
return '::'.join(namespaces[idx:] + [name])
else:
return name
def wrap_namespace(self, namespace):
"""Wrap the complete `namespace`."""
wrapped = ""
includes = ""
namespaces = namespace.full_namespaces()
if not self._partial_match(namespaces, self.top_module_namespaces):
return "", ""
if len(namespaces) < len(self.top_module_namespaces):
for element in namespace.content:
if isinstance(element, parser.Include):
includes += ("{}\n".format(element).replace('<', '"').replace('>', '"'))
if isinstance(element, parser.Namespace):
(
wrapped_namespace,
includes_namespace,
) = self.wrap_namespace( # noqa
element)
wrapped += wrapped_namespace
includes += includes_namespace
else:
module_var = self._gen_module_var(namespaces)
if len(namespaces) > len(self.top_module_namespaces):
wrapped += (' ' * 4 + 'pybind11::module {module_var} = '
'{parent_module_var}.def_submodule("{namespace}", "'
'{namespace} submodule");\n'.format(
module_var=module_var,
namespace=namespace.name,
parent_module_var=self._gen_module_var(namespaces[:-1]),
))
for element in namespace.content:
if isinstance(element, parser.Include):
includes += ("{}\n".format(element).replace('<', '"').replace('>', '"'))
elif isinstance(element, parser.Namespace):
(
wrapped_namespace,
includes_namespace,
) = self.wrap_namespace( # noqa
element)
wrapped += wrapped_namespace
includes += includes_namespace
elif isinstance(element, instantiator.InstantiatedClass):
wrapped += self.wrap_instantiated_class(element)
# Global functions.
all_funcs = [
func for func in namespace.content
Squashed 'wrap/' changes from aae9b4605..3eff76f60 3eff76f60 Merge pull request #53 from borglab/feature/refactor 13215dfa7 Merge pull request #52 from borglab/fix/tests 696913b11 install setuptools 9523328ba Merge branch 'master' into fix/tests 7c630b361 some more cleanup 656993a71 cleaned up Typename a16f6f38e move qualified and basis type outside to their own class scope 72ead8bd7 Merge pull request #51 from borglab/fix/test-interface-parser 6deefd4fc added tests for interface_parser 50d490a85 Merge pull request #50 from borglab/feature/refs-all-types be4511290 updated docs for BasisType 0e80b0d8c update MATLAB tests 0015d7397 added support for shared pointer and ref for basis types 86d2158f1 remove std::string from list of Basis types 94f928441 ignore code coverage reports 2033dd345 replace prints with log.debug statements ae98091b3 fix deprecation in doc tests 13a2f66c4 Merge pull request #46 from borglab/feature/new-shared-pointer 3c7d85865 updated docs 6d7897088 use @ for raw pointer, go back to * for shared pointer 1d6194c57 updated matlab wrapper to handle both raw and shared pointers 1448f6924 fix some failing tests 2ab1dae32 Merge branch 'master' into feature/new-shared-pointer 96f8a56bd Merge pull request #47 from borglab/fix/ci 6003203f3 run CI only for pull requests a8f29ead1 fix the python version yml key fcae17227 check if directory exists when testing f592f08c9 explicit pip3 so that we don't use Python2 d49c2f3c2 correct call for pip dfe360526 fix the CI 149b7c523 docs for templated functions f2189acc6 support typedefing for templated functions 965458a2b added test for templated functions eaff6e6ab made is_const common for all types 3d9c70b32 added tests and cleaned up a bit 010b89626 support for simple pointers on basis types 6b98fd80c new syntax for shared_ptr ff7ad0b78 support for templated functions a1a443c8d Merge pull request #43 from borglab/fix/cmake-and-matlab 2f3a055e4 remove accidentally committed file 770d055e2 set proper paths for cmake and eschew relative paths 773d01ae1 fix bug in matlab wrapper 721ef740f Merge pull request #41 from borglab/feature/type-hints 67aac9758 minor refactor of CI yml e6a63ae0c fix all mypy issues a3aaa3e7c remove a lot of linter issues from matlab_wrapper a96db522f static typing for interface_parser git-subtree-dir: wrap git-subtree-split: 3eff76f604b5ba9e71cf4947654e288142ed7a94
2021-03-24 12:36:02 +08:00
if isinstance(func, (parser.GlobalFunction,
instantiator.InstantiatedGlobalFunction))
]
wrapped += self.wrap_methods(
all_funcs,
self._add_namespaces('', namespaces)[:-2],
prefix='\n' + ' ' * 4 + module_var,
suffix=';',
)
return wrapped, includes
def wrap(self):
"""Wrap the code in the interface file."""
wrapped_namespace, includes = self.wrap_namespace(self.module)
# Export classes for serialization.
boost_class_export = ""
for cpp_class in self._serializing_classes:
new_name = cpp_class
# The boost's macro doesn't like commas, so we have to typedef.
if ',' in cpp_class:
new_name = re.sub("[,:<> ]", "", cpp_class)
boost_class_export += "typedef {cpp_class} {new_name};\n".format( # noqa
cpp_class=cpp_class,
new_name=new_name,
)
boost_class_export += "BOOST_CLASS_EXPORT({new_name})\n".format(new_name=new_name, )
holder_type = "PYBIND11_DECLARE_HOLDER_TYPE(TYPE_PLACEHOLDER_DONOTUSE, " \
"{shared_ptr_type}::shared_ptr<TYPE_PLACEHOLDER_DONOTUSE>);"
include_boost = "#include <boost/shared_ptr.hpp>" if self.use_boost else ""
return self.module_template.format(
include_boost=include_boost,
module_name=self.module_name,
includes=includes,
holder_type=holder_type.format(shared_ptr_type=('boost' if self.use_boost else 'std'))
if self.use_boost else "",
wrapped_namespace=wrapped_namespace,
boost_class_export=boost_class_export,
)