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										 |  |  | /* ----------------------------------------------------------------------------
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							|  |  |  | 
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							|  |  |  |  * GTSAM Copyright 2010, Georgia Tech Research Corporation,  | 
					
						
							|  |  |  |  * Atlanta, Georgia 30332-0415 | 
					
						
							|  |  |  |  * All Rights Reserved | 
					
						
							|  |  |  |  * Authors: Frank Dellaert, et al. (see THANKS for the full author list) | 
					
						
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							|  |  |  |  * See LICENSE for the license information | 
					
						
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							|  |  |  |  * -------------------------------------------------------------------------- */ | 
					
						
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							|  |  |  | /**
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										 |  |  |  * @file StaticMethod.ccp | 
					
						
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										 |  |  |  * @author Frank Dellaert | 
					
						
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											2012-06-27 02:52:27 +08:00
										 |  |  |  * @author Andrew Melim | 
					
						
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											2012-07-13 06:28:28 +08:00
										 |  |  |  * @author Richard Roberts | 
					
						
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										 |  |  |  **/ | 
					
						
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										 |  |  | #include "StaticMethod.h"
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										 |  |  | #include "utilities.h"
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										 |  |  | #include "Class.h"
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										 |  |  | #include <boost/lexical_cast.hpp>
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										 |  |  | #include <boost/algorithm/string.hpp>
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										 |  |  | #include <iostream>
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							|  |  |  | #include <fstream>
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											2011-12-02 10:32:18 +08:00
										 |  |  | 
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							|  |  |  | using namespace std; | 
					
						
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										 |  |  | using namespace wrap; | 
					
						
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										 |  |  | 
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										 |  |  | /* ************************************************************************* */ | 
					
						
							|  |  |  | void StaticMethod::proxy_header(FileWriter& proxyFile) const { | 
					
						
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										 |  |  |   string upperName = matlabName(); | 
					
						
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											2014-11-14 00:34:33 +08:00
										 |  |  |   upperName[0] = toupper(upperName[0], locale()); | 
					
						
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										 |  |  |   proxyFile.oss << "    function varargout = " << upperName << "(varargin)\n"; | 
					
						
							|  |  |  | } | 
					
						
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										 |  |  | /* ************************************************************************* */ | 
					
						
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										 |  |  | string StaticMethod::wrapper_call(FileWriter& wrapperFile, Str cppClassName, | 
					
						
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										 |  |  |     Str matlabUniqueName, const ArgumentList& args) const { | 
					
						
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										 |  |  |   // check arguments
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							|  |  |  |   // NOTE: for static functions, there is no object passed
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							|  |  |  |   wrapperFile.oss << "  checkArguments(\"" << matlabUniqueName << "." << name_ | 
					
						
							|  |  |  |       << "\",nargout,nargin," << args.size() << ");\n"; | 
					
						
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							|  |  |  |   // unwrap arguments, see Argument.cpp
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							|  |  |  |   args.matlab_unwrap(wrapperFile, 0); // We start at 0 because there is no self object
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							|  |  |  |   // call method and wrap result
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							|  |  |  |   // example: out[0]=wrap<bool>(staticMethod(t));
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							|  |  |  |   string expanded = cppClassName + "::" + name_; | 
					
						
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										 |  |  |   if (templateArgValue_) | 
					
						
							|  |  |  |     expanded += ("<" + templateArgValue_->qualifiedName("::") + ">"); | 
					
						
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											2014-11-14 00:28:05 +08:00
										 |  |  | 
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							|  |  |  |   return expanded; | 
					
						
							|  |  |  | } | 
					
						
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							|  |  |  | /* ************************************************************************* */ | 
					
						
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											2016-09-12 06:14:19 +08:00
										 |  |  | void StaticMethod::emit_cython_pxd(FileWriter& file, const Class& cls) const { | 
					
						
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										 |  |  |   for(size_t i = 0; i < nrOverloads(); ++i) { | 
					
						
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										 |  |  |     file.oss << "        @staticmethod\n"; | 
					
						
							|  |  |  |     file.oss << "        "; | 
					
						
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											2016-12-16 13:23:45 +08:00
										 |  |  |     returnVals_[i].emit_cython_pxd(file, cls.pxdClassName(), cls.templateArgs); | 
					
						
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											2016-11-20 22:24:43 +08:00
										 |  |  |     file.oss << name_ + ((i>0)?"_" + to_string(i):"") << " \"" << name_ << "\"" << "("; | 
					
						
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											2016-12-16 13:23:45 +08:00
										 |  |  |     argumentList(i).emit_cython_pxd(file, cls.pxdClassName(), cls.templateArgs); | 
					
						
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											2016-12-20 06:53:14 +08:00
										 |  |  |     file.oss << ") except +\n"; | 
					
						
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										 |  |  |   } | 
					
						
							|  |  |  | } | 
					
						
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										 |  |  | /* ************************************************************************* */ | 
					
						
							|  |  |  | void StaticMethod::emit_cython_wrapper_pxd(FileWriter& file, | 
					
						
							|  |  |  |     const Class& cls) const { | 
					
						
							|  |  |  |   if (nrOverloads() > 1) { | 
					
						
							|  |  |  |     for (size_t i = 0; i < nrOverloads(); ++i) { | 
					
						
							|  |  |  |       string funcName = name_ + "_" + to_string(i); | 
					
						
							|  |  |  |       file.oss << "    @staticmethod\n"; | 
					
						
							|  |  |  |       file.oss << "    cdef tuple " + funcName + "(tuple args, dict kwargs)\n"; | 
					
						
							|  |  |  |     } | 
					
						
							|  |  |  |   } | 
					
						
							|  |  |  | } | 
					
						
							|  |  |  | 
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										 |  |  | /* ************************************************************************* */ | 
					
						
							|  |  |  | void StaticMethod::emit_cython_pyx_no_overload(FileWriter& file, | 
					
						
							|  |  |  |                                                const Class& cls) const { | 
					
						
							|  |  |  |   assert(nrOverloads() == 1); | 
					
						
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											2016-11-30 18:56:07 +08:00
										 |  |  |   file.oss << "    @staticmethod\n"; | 
					
						
							|  |  |  |   file.oss << "    def " << name_ << "("; | 
					
						
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											2016-11-20 22:24:43 +08:00
										 |  |  |   argumentList(0).emit_cython_pyx(file); | 
					
						
							|  |  |  |   file.oss << "):\n"; | 
					
						
							|  |  |  | 
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							|  |  |  |   /// Call cython corresponding function and return
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												convert numpy input params to dtype float and order 'F' automatically
using numpy.astype(...). No copy if the params are already in the correct dtype and storage order.
For a function
    f(Matrix A, Matrix B),
simply wrapping it to pyx as
   f(A.astype(float, order='F', copy=False), B.astype(float, order='F', copy=False))
won't work.
It produces a strange side-effect that the content of A is overwritten by B and the two inputs are the same (data address) inside the function!
This is because Cython decreases the ref count for the temporary variable resulted from A.astype(...) before generates the wrap for B.astype(...).
Hence, the A.astype temp var is probably reused for B.astype, and they were pointing to the same data address.
For that reason, we have to go a longer route and wrap it as:
  A = A.astype(float, order='F', copy=False)
  B = B.astype(float, order='F', copy=False)
  f(A, B)
For future ref., here is a sample of the wrongly generated code that wraps the JacobianFactor constructor:
Jacobian(Key i1, Matrix A1, Key i2, Matrix A2, Vector b, noiseModel::Diagonal model)
Wrongly wrapped pyx code:
self.shared_CJacobianFactor_ = shared_ptr[CJacobianFactor](new CJacobianFactor(i1, <MatrixXd>(Map[MatrixXd](A1.astype(float, order='F',copy=False)), i2, <MatrixXd>(Map[MatrixXd](A2.astype(float, order='F', copy=False)), <VectorXd>(Map[VectorXd](b.astype(float, order='F', copy=False))), model.shared_CnoiseModel_Diagonal_))
The problematic Cython generated CPP code with a comment on the problematic line:
/////////////////////////////////////////
// WRONG VERSION
/////////////////////////////////////////
  __pyx_t_12 = __Pyx_PyObject_GetAttrStr(((PyObject *)__pyx_v_A1), __pyx_n_s_astype); if (unlikely(!__pyx_t_12)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_12);
  __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_4);
  __Pyx_INCREF(((PyObject *)(&PyFloat_Type)));
  __Pyx_GIVEREF(((PyObject *)(&PyFloat_Type)));
  PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)(&PyFloat_Type)));
  __pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_5);
  if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_order, __pyx_n_s_F) < 0) __PYX_ERR(0, 2107, __pyx_L1_error)
  if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_copy, Py_False) < 0) __PYX_ERR(0, 2107, __pyx_L1_error)
  __pyx_t_13 = __Pyx_PyObject_Call(__pyx_t_12, __pyx_t_4, __pyx_t_5); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_13);
  __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0;
  __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
  __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
  if (!(likely(((__pyx_t_13) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_13, __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 2107, __pyx_L1_error)
  try {
    __pyx_t_14 = eigency::Map<Eigen::MatrixXd> (((PyArrayObject *)__pyx_t_13));
  } catch(...) {
    __Pyx_CppExn2PyErr();
    __PYX_ERR(0, 2107, __pyx_L1_error)
  }
///////////////////////////////////////////////
  __Pyx_DECREF(__pyx_t_13); __pyx_t_13 = 0;  	//<------- Problematic line!!! Killing this will result in the correct result!
///////////////////////////////////////////////
  __pyx_t_13 = __Pyx_PyObject_GetAttrStr(((PyObject *)__pyx_v_A2), __pyx_n_s_astype); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_13);
  __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_5);
  __Pyx_INCREF(((PyObject *)(&PyFloat_Type)));
  __Pyx_GIVEREF(((PyObject *)(&PyFloat_Type)));
  PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)(&PyFloat_Type)));
  __pyx_t_4 = PyDict_New(); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_4);
  if (PyDict_SetItem(__pyx_t_4, __pyx_n_s_order, __pyx_n_s_F) < 0) __PYX_ERR(0, 2107, __pyx_L1_error)
  if (PyDict_SetItem(__pyx_t_4, __pyx_n_s_copy, Py_False) < 0) __PYX_ERR(0, 2107, __pyx_L1_error)
  __pyx_t_12 = __Pyx_PyObject_Call(__pyx_t_13, __pyx_t_5, __pyx_t_4); if (unlikely(!__pyx_t_12)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_12);
  __Pyx_DECREF(__pyx_t_13); __pyx_t_13 = 0;
  __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
  __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
  if (!(likely(((__pyx_t_12) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_12, __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 2107, __pyx_L1_error)
  try {
    __pyx_t_15 = eigency::Map<Eigen::MatrixXd> (((PyArrayObject *)__pyx_t_12));
  } catch(...) {
    __Pyx_CppExn2PyErr();
    __PYX_ERR(0, 2107, __pyx_L1_error)
  }
  __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0;
  __pyx_t_12 = __Pyx_PyObject_GetAttrStr(((PyObject *)__pyx_v_b), __pyx_n_s_astype); if (unlikely(!__pyx_t_12)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_12);
  __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_4);
  __Pyx_INCREF(((PyObject *)(&PyFloat_Type)));
  __Pyx_GIVEREF(((PyObject *)(&PyFloat_Type)));
  PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)(&PyFloat_Type)));
  __pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_5);
  if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_order, __pyx_n_s_F) < 0) __PYX_ERR(0, 2107, __pyx_L1_error)
  if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_copy, Py_False) < 0) __PYX_ERR(0, 2107, __pyx_L1_error)
  __pyx_t_13 = __Pyx_PyObject_Call(__pyx_t_12, __pyx_t_4, __pyx_t_5); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2107, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_13);
  __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0;
  __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
  __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
  if (!(likely(((__pyx_t_13) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_13, __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 2107, __pyx_L1_error)
  try {
    __pyx_t_16 = eigency::Map<Eigen::VectorXd> (((PyArrayObject *)__pyx_t_13));
  } catch(...) {
    __Pyx_CppExn2PyErr();
    __PYX_ERR(0, 2107, __pyx_L1_error)
  }
  __Pyx_DECREF(__pyx_t_13); __pyx_t_13 = 0;
  try {
    __pyx_t_17 = new gtsam::JacobianFactor(__pyx_v_i1, ((Eigen::MatrixXd)__pyx_t_14), __pyx_v_i2, ((Eigen::MatrixXd)__pyx_t_15), ((Eigen::VectorXd)__pyx_t_16), __pyx_v_model->shared_CnoiseModel_Diagonal_);
  } catch(...) {
    __Pyx_CppExn2PyErr();
    __PYX_ERR(0, 2107, __pyx_L1_error)
  }
  __pyx_v_self->shared_CJacobianFactor_ = boost::shared_ptr<gtsam::JacobianFactor> (__pyx_t_17);
											
										 
											2017-03-16 01:47:11 +08:00
										 |  |  |   file.oss << argumentList(0).pyx_convertEigenTypeAndStorageOrder("        "); | 
					
						
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											2017-08-07 02:07:13 +08:00
										 |  |  |   string call = pyx_functionCall(cls.pxd_class_in_pyx(), name_, 0); | 
					
						
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											2016-11-30 18:56:07 +08:00
										 |  |  |   file.oss << "        "; | 
					
						
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										 |  |  |   if (!returnVals_[0].isVoid()) { | 
					
						
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										 |  |  |     file.oss << "return " << returnVals_[0].pyx_casting(call) << "\n"; | 
					
						
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										 |  |  |   } else | 
					
						
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											2017-08-07 02:07:13 +08:00
										 |  |  |     file.oss << call << "\n"; | 
					
						
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											2016-11-20 22:24:43 +08:00
										 |  |  |   file.oss << "\n"; | 
					
						
							|  |  |  | } | 
					
						
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											2016-09-09 19:09:39 +08:00
										 |  |  | /* ************************************************************************* */ | 
					
						
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											2016-09-10 04:39:47 +08:00
										 |  |  | void StaticMethod::emit_cython_pyx(FileWriter& file, const Class& cls) const { | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  |   size_t N = nrOverloads(); | 
					
						
							|  |  |  |   if (N == 1) { | 
					
						
							|  |  |  |     emit_cython_pyx_no_overload(file, cls); | 
					
						
							|  |  |  |     return; | 
					
						
							|  |  |  |   } | 
					
						
							|  |  |  | 
 | 
					
						
							|  |  |  |   // Dealing with overloads..
 | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |   file.oss << "    @staticmethod # overloaded\n"; | 
					
						
							| 
									
										
										
										
											2016-11-30 18:56:07 +08:00
										 |  |  |   file.oss << "    def " << name_ << "(*args, **kwargs):\n"; | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  |   for (size_t i = 0; i < N; ++i) { | 
					
						
							|  |  |  |     string funcName = name_ + "_" + to_string(i); | 
					
						
							| 
									
										
										
										
											2016-11-30 18:56:07 +08:00
										 |  |  |     file.oss << "        success, results = " << cls.pyxClassName() << "." | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |              << funcName << "(args, kwargs)\n"; | 
					
						
							| 
									
										
										
										
											2016-11-30 18:56:07 +08:00
										 |  |  |     file.oss << "        if success:\n            return results\n"; | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  |   } | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |   file.oss << "        raise TypeError('Could not find the correct overload')\n\n"; | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  | 
 | 
					
						
							| 
									
										
										
										
											2017-08-07 04:25:54 +08:00
										 |  |  |   // Create cdef methods for all overloaded methods
 | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  |   for(size_t i = 0; i < N; ++i) { | 
					
						
							|  |  |  |     string funcName = name_ + "_" + to_string(i); | 
					
						
							| 
									
										
										
										
											2017-08-07 04:25:54 +08:00
										 |  |  |     file.oss << "    @staticmethod\n"; | 
					
						
							|  |  |  |     file.oss << "    cdef tuple " + funcName + "(tuple args, dict kwargs):\n"; | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |     file.oss << "        cdef list __params\n"; | 
					
						
							|  |  |  |     if (!returnVals_[i].isVoid()) { | 
					
						
							|  |  |  |       file.oss << "        cdef " << returnVals_[i].pyx_returnType() << " return_value\n"; | 
					
						
							|  |  |  |     } | 
					
						
							|  |  |  |     file.oss << "        try:\n"; | 
					
						
							| 
									
										
										
										
											2017-08-07 04:25:54 +08:00
										 |  |  |     ArgumentList args = argumentList(i); | 
					
						
							|  |  |  |     file.oss << pyx_resolveOverloadParams(args, false, 3); | 
					
						
							| 
									
										
										
										
											2016-09-12 04:40:09 +08:00
										 |  |  | 
 | 
					
						
							| 
									
										
										
										
											2016-09-12 05:14:06 +08:00
										 |  |  |     /// Call cython corresponding function and return
 | 
					
						
							| 
									
										
										
										
											2017-08-07 04:25:54 +08:00
										 |  |  |     file.oss << args.pyx_convertEigenTypeAndStorageOrder("            "); | 
					
						
							|  |  |  |     string pxdFuncName = name_ + ((i>0)?"_" + to_string(i):""); | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |     string call = pyx_functionCall(cls.pxd_class_in_pyx(), pxdFuncName, i); | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  |     if (!returnVals_[i].isVoid()) { | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |       file.oss << "            return_value = " << call << "\n"; | 
					
						
							|  |  |  |       file.oss << "            return True, " << returnVals_[i].pyx_casting("return_value") << "\n"; | 
					
						
							|  |  |  |     } else { | 
					
						
							|  |  |  |       file.oss << "            " << call << "\n"; | 
					
						
							|  |  |  |       file.oss << "            return True, None\n"; | 
					
						
							| 
									
										
										
										
											2016-11-20 22:24:43 +08:00
										 |  |  |     } | 
					
						
							| 
									
										
										
										
											2017-08-07 02:07:13 +08:00
										 |  |  |     file.oss << "        except:\n"; | 
					
						
							|  |  |  |     file.oss << "            return False, None\n\n"; | 
					
						
							| 
									
										
										
										
											2016-09-10 04:39:47 +08:00
										 |  |  |   } | 
					
						
							|  |  |  | } | 
					
						
							|  |  |  | 
 | 
					
						
							|  |  |  | /* ************************************************************************* */ |